TAP SET in Amaranthus hypochondriacus

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

SET
PHD
zf-C2H2
TCR
Myb_DNA-binding
CXC

(Domain names are clickable)



List of proteins (34)

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namename additionClick button to show/hide sequence: Download sequence?
AHYPO_000375-RApacid=32843539 transcript=AHYPO_000375-RA locus=AHYPO_000375 ID=AHYPO_000375-RA.v1.0 annot-version=v1.0
AHYPO_000496-RApacid=32833288 transcript=AHYPO_000496-RA locus=AHYPO_000496 ID=AHYPO_000496-RA.v1.0 annot-version=v1.0
AHYPO_001628-RApacid=32846416 transcript=AHYPO_001628-RA locus=AHYPO_001628 ID=AHYPO_001628-RA.v1.0 annot-version=v1.0
AHYPO_002635-RApacid=32841983 transcript=AHYPO_002635-RA locus=AHYPO_002635 ID=AHYPO_002635-RA.v1.0 annot-version=v1.0
AHYPO_003170-RApacid=32826269 transcript=AHYPO_003170-RA locus=AHYPO_003170 ID=AHYPO_003170-RA.v1.0 annot-version=v1.0
AHYPO_003317-RApacid=32839879 transcript=AHYPO_003317-RA locus=AHYPO_003317 ID=AHYPO_003317-RA.v1.0 annot-version=v1.0
AHYPO_003346-RApacid=32839861 transcript=AHYPO_003346-RA locus=AHYPO_003346 ID=AHYPO_003346-RA.v1.0 annot-version=v1.0
AHYPO_003889-RApacid=32833181 transcript=AHYPO_003889-RA locus=AHYPO_003889 ID=AHYPO_003889-RA.v1.0 annot-version=v1.0
AHYPO_003890-RApacid=32833182 transcript=AHYPO_003890-RA locus=AHYPO_003890 ID=AHYPO_003890-RA.v1.0 annot-version=v1.0
AHYPO_005114-RApacid=32845509 transcript=AHYPO_005114-RA locus=AHYPO_005114 ID=AHYPO_005114-RA.v1.0 annot-version=v1.0
AHYPO_006675-RApacid=32837395 transcript=AHYPO_006675-RA locus=AHYPO_006675 ID=AHYPO_006675-RA.v1.0 annot-version=v1.0
AHYPO_007779-RApacid=32838617 transcript=AHYPO_007779-RA locus=AHYPO_007779 ID=AHYPO_007779-RA.v1.0 annot-version=v1.0
AHYPO_007879-RApacid=32828742 transcript=AHYPO_007879-RA locus=AHYPO_007879 ID=AHYPO_007879-RA.v1.0 annot-version=v1.0
AHYPO_008616-RApacid=32842394 transcript=AHYPO_008616-RA locus=AHYPO_008616 ID=AHYPO_008616-RA.v1.0 annot-version=v1.0
AHYPO_008825-RApacid=32828232 transcript=AHYPO_008825-RA locus=AHYPO_008825 ID=AHYPO_008825-RA.v1.0 annot-version=v1.0
AHYPO_010170-RApacid=32834322 transcript=AHYPO_010170-RA locus=AHYPO_010170 ID=AHYPO_010170-RA.v1.0 annot-version=v1.0
AHYPO_010404-RApacid=32828640 transcript=AHYPO_010404-RA locus=AHYPO_010404 ID=AHYPO_010404-RA.v1.0 annot-version=v1.0
AHYPO_010873-RApacid=32824457 transcript=AHYPO_010873-RA locus=AHYPO_010873 ID=AHYPO_010873-RA.v1.0 annot-version=v1.0
AHYPO_011456-RApacid=32840724 transcript=AHYPO_011456-RA locus=AHYPO_011456 ID=AHYPO_011456-RA.v1.0 annot-version=v1.0
AHYPO_012373-RApacid=32828162 transcript=AHYPO_012373-RA locus=AHYPO_012373 ID=AHYPO_012373-RA.v1.0 annot-version=v1.0
AHYPO_012574-RApacid=32844604 transcript=AHYPO_012574-RA locus=AHYPO_012574 ID=AHYPO_012574-RA.v1.0 annot-version=v1.0
AHYPO_013941-RApacid=32836964 transcript=AHYPO_013941-RA locus=AHYPO_013941 ID=AHYPO_013941-RA.v1.0 annot-version=v1.0
AHYPO_014442-RApacid=32829004 transcript=AHYPO_014442-RA locus=AHYPO_014442 ID=AHYPO_014442-RA.v1.0 annot-version=v1.0
AHYPO_014682-RApacid=32846247 transcript=AHYPO_014682-RA locus=AHYPO_014682 ID=AHYPO_014682-RA.v1.0 annot-version=v1.0
AHYPO_014688-RApacid=32846270 transcript=AHYPO_014688-RA locus=AHYPO_014688 ID=AHYPO_014688-RA.v1.0 annot-version=v1.0
AHYPO_015262-RApacid=32838432 transcript=AHYPO_015262-RA locus=AHYPO_015262 ID=AHYPO_015262-RA.v1.0 annot-version=v1.0
AHYPO_015596-RApacid=32837452 transcript=AHYPO_015596-RA locus=AHYPO_015596 ID=AHYPO_015596-RA.v1.0 annot-version=v1.0
AHYPO_015790-RApacid=32837671 transcript=AHYPO_015790-RA locus=AHYPO_015790 ID=AHYPO_015790-RA.v1.0 annot-version=v1.0
AHYPO_016169-RApacid=32842194 transcript=AHYPO_016169-RA locus=AHYPO_016169 ID=AHYPO_016169-RA.v1.0 annot-version=v1.0
AHYPO_018431-RApacid=32824143 transcript=AHYPO_018431-RA locus=AHYPO_018431 ID=AHYPO_018431-RA.v1.0 annot-version=v1.0
AHYPO_020329-RApacid=32841243 transcript=AHYPO_020329-RA locus=AHYPO_020329 ID=AHYPO_020329-RA.v1.0 annot-version=v1.0
AHYPO_020563-RApacid=32825465 transcript=AHYPO_020563-RA locus=AHYPO_020563 ID=AHYPO_020563-RA.v1.0 annot-version=v1.0
AHYPO_022090-RApacid=32824635 transcript=AHYPO_022090-RA locus=AHYPO_022090 ID=AHYPO_022090-RA.v1.0 annot-version=v1.0
AHYPO_022439-RApacid=32830179 transcript=AHYPO_022439-RA locus=AHYPO_022439 ID=AHYPO_022439-RA.v1.0 annot-version=v1.0
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
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